Browse of TCMCG018C13337 protein

CDS

Accession Number	TCMCG018C13337
gbkey	CDS
Protein Id	XP_011648998.1
Location	join(6201353..6201672,6201925..6202071,6202587..6202740,6202992..6203127,6209775..6209920,6213528..6213623,6213800..6213852,6214613..6214744,6214866..6214917,6215076..6215195,6220120..6220254,6224574..6224702,6224792..6224869,6225523..6225663,6227073..6227167,6231314..6231510,6238675..6239456,6241496..6241576,6241662..6241727,6241819..6241896,6245584..6245811,6249184..6249315,6249509..6249685,6249809..6249994,6250109..6250491,6250717..6250831)
Gene	LOC101220950
GeneID	101220950
Organism	Cucumis sativus

Protein

Length	1452aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA182750
db_source	XM_011650696.2
Definition	cleavage and polyadenylation specificity factor subunit 1 isoform X1 [Cucumis sativus]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGTTTCGCCGCTTATAGAATGATGCACTGGCCTACGGGCATTGAGAATTGTGATTCAGCCTACATCACCCATTCTCGCGCCGACTTCGTCCCCGCCGTCACATCTCACTCTGACGATCTTGACTCCGACTGGCACCCCCGCCGAGATATTGGTCCAGTTCCCAATCTTGTTGTCACCGCCGGCAATGTCCTCGAGGTTTATGTTGTTAGGGTACTAGAGGAAGGTGGAAGAGAATCAAAAAGCTCAGGAGAAGTCAGACGCGGTGGCATTATGGATGGTGTCTCTGGGGCCTCACTCGAGCTTGTTTGCCACTACAGGTTGCATGGTAATGTTGAGTCCATGGCAATTTTGTCTAGTAGAGGAGGTGATGGTTCCAAGAAGAGAGATTCGATTATATTAGTCTTTCAAGAAGCAAAAATTTCAGTGCTAGAGTTTGATGATTCTACCCATAGTCTCCGTACAAGCTCAATGCATTGCTTTGATGGCCCTCAATGGCTTCATTTGAAAAGAGGTCGAGAATCATTTGCAAGAGGTCCAGTAGTAAAGGTTGACCCTCAAGGCAGGTGTGGAGGAGTTCTTGTCTATGGTTTGCAAATGATAATACTTAAGGCTTCTCAGGCTGGTTCCGGTTTGGTTGTGGACGATGAAGCTTTTGGTAATACAGGTGCAATTTCTGCTCGAGTGGAATCGTCATACCTCATTAACCTAAGGGATTTGGATGTGAAGCATGTAAAAGATTTTGTATTTGTACACGGTTATATTGAACCTGTGATGGTGATCCTTCATGAACAGGAACTTACCTGGGCTGGTCGTGTTTCTTGGAAGCATCACACGTGTATGGTTTCTGCACTAAGTATTAGCACAACATTGAAGCAACATCCTCTAATATGGTCTGCCAGTAACCTACCTCATGATGCTTACAAGCTGCTTGCGGTGCCATCGCCAATTGGTGGTGTACTTGTCATCAGTGCAAATAGTATACATTATAACAGTCAGTCAGCTTCATGCATGTTGGCTTTGAATAATTATGCTGTTTCTGCCGATAGCAGTCAAGATATGCCTAGATCAAATTTTAATGTGGAATTGGACGCTGCCAATGCTACATGGTTGGTAAATGATGTGGCCTTGCTGTCAACCAAGACTGGGGAGCTATTATTGCTGGCACTTGTCTATGATGGACGGGTTGTGCAGAGACTTGACCTTTCGAAGTCTAAAGCTTCAGTACTCACATCGGGCATTGCATCAATTGGAAATTCATTATTTTTTCTGGGCAGTCGATTGGGAGATAGTTTACTTGTGCAGTTTAGTTGTGGAGTGGGATCCTCAGGATTGGCATCCAATTTAAAGGACGAGGGTGGAGATATTGAAGTTGATGCACATACAGCCAAGCGAATGCGTAGGTCATCTTCTGATGCTCTACAAGATATGGTTGGAGGAGATGAGCTATCCTTGTATGGTTCGGCTGCAAATAATACAGAGTCTGCTCAGAAAATTTTTTCTTTTGCTGTTAGAGACTCATTGATCAATATTGGACCTCTGAAGGATTTCTCCTACGGTTTAAGAATTAATGCAGATCCTAATGCCACTGGAATTGCCAAACAAAGCAATTATGAACTCGTTTGTTGTTCGGGTCATGGTAAAAATGGGGCATTATGCATTCTTCGCCAGTCAATTCGCCCTGAAATGATTACCGAGGTTGAGCTGCCAGGTTGTAAAGGCATTTGGACTGTTTACCACAAAAATACTCGTGGTAGTATTGCTGATTCTTCTAGAATGGTTCCTGATGATGATGAATATCATGCATATTTGATCATAAGCCTTGAGGCTCGCACAATGGTACTTGTAACTGGAGAACTCCTAACTGAAGTGACTGAGAGTGTTGACTACTTTGTGCATGGGAGAACAATCGCTGCAGGCAACTTGTTTGGAAGGCGTCGAGTTATCCAGGTTTATGAAAGTGGTGCACGAATTTTGGATGGGTCTTTTATGACTCAAGATTTGAACTTGGTAGTCAATGGCAATGAATCTGGAAATGCCTCTGAAGGCTGTACCGTGTTATCTGCATCTATTAGTGATCCATATGTTTTGCTGACTATGACAGATGGGAGTATTCGGTTACTGGTTGGAGATTCTTCTTCTTGCTCAGTTTCTGTATCTGCACCAGCTGCTTTTGGGAGTTCAAAAAAATGTGTATCTTCTTGTACTCTTTATCAGGATAAGGGCATTGAACCGTGGCTACGAATGACAAGTACAGACGCATGGCTTTCCACAGGAGTTGGTGAGACAATTGATGGTACCGATGGCTCACTCCAAGATCAGGGGGACATATATTGTGTTGCTTGTTATGATAATGGAGACCTTGAAATATTTGACGTACCAAATTTCACTAGCGTTTTCTATGTGGATAAATTTGTTTCTGGAAAATCGCATTTAGTTGATCATCAAATATCAGACTTGCAGAAATCTTCTGAGGTCGATCAAAATTCTCAGGAATTGATAAGCCATGGTAGGAACGAAAGTTCACAAAATATGAAGGTCATTGAGGTAGCCATGCAGAGGTGGTCAGGGCAGCATAGCCGCCCATTTCTTTTTGGAATATTGACAGACGGGACAATCCTTTGTTACCATGCTTATTTATTTGAGAGTACAGACAGTGCCTCTAAAATTGATGATTCGGTTTCCATTGACAATTCTGTTAGCTCAAGCAATATGAGTTCTTCTAGATTAAGAAATTTGAGATTTCTTCGTGTCCCTTTGGACATACAAGGAAGGGAAGATATGCCAAATGGAACCTTGTCTTGTAGATTATCTATTTTCAAAAATATTTCTGGTTATCAGGGGCTATTTCTCTGTGGGTCAAGACCTGCTTGGTTTATGGTGTTCAGAGAACGGCTTCGAGTTCACCCACAGCTATGTGATGGACCCATTGTTGCCTTTGCCGTGCTACATAATGTAAACTGTAACCATGGACTTATATATGTCACATCACAGGGTGTTTTGAAGATTTGTCAACTTCCATCTACATCGAACTATGATAATTACTGGCCGGTACAGAAAGTTCCACTGAAAGGAACTCCACACCAGGTGACTTACTTCCACGAAAAGAATCTGTACCCTGTTATAATTTCAGCGCCCGTTCAGAAGCCATTGAATCAAGTGCTTTCATCAATGGTTGATCAAGATGTTGGTCACGTTGAGAATCATAACTTGAGTGCTGATGAGCTGCAACAAACTTACTCTGTGGAAGAGTTTGAGATTCGGATTTTGGAACCAGAAAAATCTGGGGGCCCTTGGCAAACTAGGGCTACAATTGCTATGCACAGTTCTGAAAATGCCCTTACCATTCGAGTTGTTACACTGTTGAACACAACCACGAAAGAGAATGAAACACTTTTAGCAGTTGGAACTGCATATGTGCAAGGGGAGGATGTTGCTGCAAGAGGAAGAGTGCTTTTATTTTCTGTTGGAAAAGATGCTGATAATTCACAGACCTTGGTTTCAGAGGTTTATTCGAAAGAATTGAAGGGTGCTATTTCTGCTTTAGCCTCTCTGCAAGGTCATCTATTGATAGCTTCTGGTCCTAAAATAATCTTGCACAAATGGACTGGTGCAGAGTTGAATGGCATTGCATTTTATGATGTTCCACCCTTATATGTTGTGAGCTTGAATATTGTCAAGAATTTTATACTTCTTGGTGATATACACAAGAGCATTTACTTTTTGAGTTGGAAAGAACAGGGAGCTCAACTGAGCTTGTTGGCGAAGGATTTTGGTTCTCTAGACTGCTATGCAACAGAATTTCTGATTGATGGAAGCACTCTTAGCCTTACTGTTTCTGATGATCAGAAGAATATTCAGATATTTTATTATGCACCAAAGTCAACCGAAAGTTGGAAAGGGCAGAAGCTTCTATCAAGAGCTGAATTTCATGTCGGTGCTCACGTGACGAAGTTTCTACGGCTACAGATGTTGTCTACCAGTTCGGACAAAGCATGCAGTACAGTTTCTGACAAGACCAATCGCTTCGCTTTGTTATTTGGCACCCTTGATGGAAGTATTGGTTGTATTGCGCCTCTTGATGAACTCACATTTCGAAGACTGCAGTCATTACAAAAGAAGCTTGGTGATGCCGTTCCCCATGTTGGTGGTTTAAACCCAAGGTCTTTCCGCCAGTTTCATTCAAATGGAAAGGTTCATCGACGTGGGCCAGATAGCATAGTTGATTGTGAATTACTGTGCCACTATGAGATGCTACCGTTGGAGGAGCAGCTTGATATTGCTCACCAAATCGGGACAACTCGTTCGCAGATTCTCTCAAACTTGAATGACCTCTCTCTGGGAACAAGTTTCTTATAA

Protein:   MSFAAYRMMHWPTGIENCDSAYITHSRADFVPAVTSHSDDLDSDWHPRRDIGPVPNLVVTAGNVLEVYVVRVLEEGGRESKSSGEVRRGGIMDGVSGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSTHSLRTSSMHCFDGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQMIILKASQAGSGLVVDDEAFGNTGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMVSALSISTTLKQHPLIWSASNLPHDAYKLLAVPSPIGGVLVISANSIHYNSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDEGGDIEVDAHTAKRMRRSSSDALQDMVGGDELSLYGSAANNTESAQKIFSFAVRDSLINIGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGKNGALCILRQSIRPEMITEVELPGCKGIWTVYHKNTRGSIADSSRMVPDDDEYHAYLIISLEARTMVLVTGELLTEVTESVDYFVHGRTIAAGNLFGRRRVIQVYESGARILDGSFMTQDLNLVVNGNESGNASEGCTVLSASISDPYVLLTMTDGSIRLLVGDSSSCSVSVSAPAAFGSSKKCVSSCTLYQDKGIEPWLRMTSTDAWLSTGVGETIDGTDGSLQDQGDIYCVACYDNGDLEIFDVPNFTSVFYVDKFVSGKSHLVDHQISDLQKSSEVDQNSQELISHGRNESSQNMKVIEVAMQRWSGQHSRPFLFGILTDGTILCYHAYLFESTDSASKIDDSVSIDNSVSSSNMSSSRLRNLRFLRVPLDIQGREDMPNGTLSCRLSIFKNISGYQGLFLCGSRPAWFMVFRERLRVHPQLCDGPIVAFAVLHNVNCNHGLIYVTSQGVLKICQLPSTSNYDNYWPVQKVPLKGTPHQVTYFHEKNLYPVIISAPVQKPLNQVLSSMVDQDVGHVENHNLSADELQQTYSVEEFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGAELNGIAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSSDKACSTVSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLGDAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDIAHQIGTTRSQILSNLNDLSLGTSFL